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Abstract Fertilization is a fundamental process that triggers seed and fruit development, but the molecular mechanisms underlying fertilization-induced seed development are poorly understood. Previous research has established AGamous-Like62 (AGL62) activation and auxin biosynthesis in the endosperm as key events following fertilization in Arabidopsis (Arabidopsis thaliana) and wild strawberry (Fragaria vesca). To test the hypothesis that epigenetic mechanisms are critical in mediating the effect of fertilization on the activation of AGL62 and auxin biosynthesis in the endosperm, we first identified and analyzed imprinted genes from the endosperm of wild strawberries. We isolated endosperm tissues from F1 seeds of 2 wild strawberry F. vesca subspecies, generated endosperm-enriched transcriptomes, and identified candidate Maternally Expressed and Paternally Expressed Genes (MEGs and PEGs). Through bioinformatic analyses, we identified 4 imprinted genes that may be involved in regulating the expression of FveAGL62 and auxin biosynthesis genes. We conducted functional analysis of a maternally expressed gene FveMYB98 through CRISPR-knockout and over-expression in transgenic strawberries as well as analysis in heterologous systems. FveMYB98 directly repressed FveAGL62 at stage 3 endosperm, which likely serves to limit auxin synthesis and endosperm proliferation. These results provide an inroad into the regulation of early-stage seed development by imprinted genes in strawberries, suggest the potential function of imprinted genes in parental conflict, and identify FveMYB98 as a regulator of a key transition point in endosperm development.more » « less
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The remarkable diversity of leaf forms allows plants to adapt to their living environment. In general, leaf diversity is shaped by leaf complexity (compound or simple) and leaf margin pattern (entire, serrated, or lobed). Prior studies in multiple species have uncovered a conserved module of CUC2-auxin that regulates both leaf complexity and margin serration. How this module is regulated in different species to contribute to the species-specific leaf form is unclear. Furthermore, the mechanistic connection between leaf complexity and leaf serration regulation is not well studied. Strawberry has trifoliate compound leaves with serrations at the margin. In the wild strawberry Fragaria vesca, a mutant named salad was isolated that showed deeper leaf serrations but normal leaf complexity. SALAD encodes a single-Myb domain protein and is expressed at the leaf margin. Genetic analysis showed that cuc2a is epistatic to salad, indicating that SALAD normally limits leaf serration depth by repressing CUC2a expression. When both Arabidopsis homologs of SALAD were knocked out, deeper serrations were observed in Arabidopsis rosette leaves, supporting a conserved function of SALAD in leaf serration regulation. We incorporated the analysis of a third strawberry mutant simple leaf 1 (sl1) with reduced leaf complexity but normal leaf serration. We showed that SL1 and SALAD independently regulate CUC2a at different stages of leaf development to, respectively, regulate leaf complexity and leaf serration. Our results provide a clear and simple mechanism of how leaf complexity and leaf serration are coordinately as well as independently regulated to achieve diverse leaf forms.more » « less
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Recent studies of disorder or non-Hermiticity induced topological insulators inject new ingredients for engineering topological matter. Here, we consider the effect of purely non-Hermitian disorders, a combination of these two ingredients, in a 1D coupled-cavity array with disordered gain and loss. Topological photonic states can be induced by increasing gain-loss disorder strength with topological invariants carried by localized states in the complex bulk spectra. The system showcases rich phase diagrams and distinct topological states from Hermitian disorders. The non-Hermitian critical behavior is characterized by the biorthogonal localization length of zero-energy edge modes, which diverges at the critical transition point and establishes the bulk-edge correspondence. Furthermore, we show that the bulk topology may be experimentally accessed by measuring the biorthogonal chiral displacement, which can be extracted from a proper Ramsey interferometer that works in both clean and disordered regions. The proposed coupled-cavity photonic setup relies on techniques that have been experimentally demonstrated and, thus, provides a feasible route toward exploring such non-Hermitian disorder driven topological insulators.more » « less
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A miniature on-chip laser is an essential component of photonic integrated circuits for a plethora of applications, including optical communication and quantum information processing. However, the contradicting requirements of small footprint, robustness, single-mode operation, and high output power have led to a multi-decade search for the optimal on-chip laser design. During this search, topological phases of matter—conceived initially in electronic materials in condensed matter physics—were successfully extended to photonics and applied to miniature laser designs. Benefiting from the topological protection, a topological edge mode laser can emit more efficiently and more robustly than one emitting from a trivial bulk mode. In addition, single-mode operation over a large range of excitation energies can be achieved by strategically manipulating topological modes in a laser cavity. In this Perspective, we discuss the recent progress of topological on-chip lasers and an outlook on future research directions.more » « less
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Abstract The R2R3-MYB transcription factor FveMYB10 is a major regulator of anthocyanin pigmentation in the red strawberry fruits. fvemyb10 loss-of-function mutants form yellow fruits but still accumulate purple-colored anthocyanins in the petioles, suggesting that anthocyanin biosynthesis is under distinct regulation in fruits and petioles. We identified a green petioles (gp)-1 mutant from chemical mutagenesis in the diploid wild strawberry Fragaria vesca that lacks anthocyanins in petioles. Using mapping-by-sequencing and transient functional assays, we confirmed that the causative mutation resides in a FveMYB10-Like (MYB10L) gene and that FveMYB10 and FveMYB10L function independently in the fruit and petiole respectively. In addition to their tissue-specific regulation, FveMYB10 and FveMYB10L respond differently to changes in light quality, produce distinct anthocyanin compositions, and preferentially activate different downstream anthocyanin biosynthesis genes in their respective tissues. This work identifies a new regulator of anthocyanin synthesis and demonstrates that two paralogous MYB genes with specialized functions enable tissue-specific regulation of anthocyanin biosynthesis in fruit and petiole tissues.more » « less
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